Hi, Carlos Cantalapiedra and me recently put together teaching material about scripting in the linux terminal.
The material can be found at repository https://github.com/eead-csic-compbio/sc ... inux_shell
There are five sessions and the goal is for you to learn the basics of the Linux shell and scripting for data sciences such as genomics and plant breeding:
session title required time URL
0 Setup prior to course session 0
1 Linux basics and files 2h session 1
2 Processes and scripts 2h session 2
3 Parsing with regular expressions 2h session 3
4 Perl one-liners 2h session 4
5 Advanced scripts 2h session 5
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